Data & Code
Find our data and code on PANGAEA, Zenodo, NASA SeaBASS, and GitHub

NASA PACE validation for the U.S. Northeast Continental Shelf

Narragansett Bay Imaging Flow CytoBot

**Agarwal, V., **V. Sonnet, K. Inomura, †A. Ciochetto, C.B. Mouw (2024) Image-derived indicators of phytoplankton community responses to Pseudo-nitzschia blooms. DOI: https://zenodo.org/records/12774348

**Carney-Almeida, J., **V. Sonnet, C.B. Mouw, J. Rines, †A.B. Ciochetto, G. Puggioni (2024) Analysis of Margalefidinium polykrikoides bloom time series in Narragansett Bay. https://github.com/VirginieSonnet/MpolykrikoidesNBay

**Agarwal, V., J. Chávez-Casillas, K. Inomura, C.B. Mouw (2024) Chlorophyll complexity. DOI: https://doi.org/10.5281/zenodo.10498357, https://github.com/vitul-agarwal-1/chl-complexity
 
**Sonnet, V., C.B. Mouw, †A. Ciochetto, **J. Carney (2024) Phytoplankton taxonomic precision and temporal sampling resolution. https://github.com/VirginieSonnet/planktonResolution
 
**Agarwal, V., K. Inomura, C.B. Mouw (2022) Trichodesmium colony formation. DOI: 10.5281/zenodo.6558209, https://github.com/vitul-agarwal-1/trichodesmium-colony-formation

Mouw, C.B., K. Hyde, A. Ciochetto (2022) ECOMON U.S. Northeast shelf optics.  NASA SeaWiFS Bio-optical Storage System (SeaBASS), NASA, DOI: 10.5067/SeaBASS/ECOMON/DATA001

Sonnet, V., L. Guidi, C.B. Mouw, G. Puggioni, S.-D. Atyata (2021) Morphological Analysis of (Phyto)Plankton Imagery (MAPI). https://github.com/VirginieSonnet/mapi

Sonnet, V., L. Guidi, C.B. Mouw, G. Puggioni, S.-D. Atyata (2021) Subsampling of Plankton Imagery Datasets and Reprojection in a morphospace (SPIDR). https://github.com/VirginieSonnet/spidr

**Sonnet, V., **J. Carney.  Narragansett Bay Phytoplankton Wiki Image Identification Gallery, https://virginie-sonnet.notion.site/Narragansett-Bay-Phytoplankton-Wiki-f7a5b9338f3f452488aeedc7115fedb5

Casey K.A., C.S. Rousseaux, W. Gregg, E. Boss, A. Chase, S. Craig, C.B. Mouw, R.A. Reynolds. D. Stramski, S. Ackleson, A. Bricaud, B. Schaeffer, M.R. Lewis, S. Maritorena, (2019) In situ high spectral resolution inherent and apparent optical property data from diverse aquatic environments. PANGAEA, DOI: https://doi.pangaea.de/10.1594/PANGAEA.902230.

Grunert, B.K., C.B. Mouw, A.B. Ciochetto (2018) DAISEA - Derivative Analysis and Iterative Spectral Evaluation of Absorption. https://github.com/bricegrunert/daisea, doi:10.5281/zenodo.1306817.

Mouw, C.B., A. Ciochetto, J.A. Yoder (2018) OC-CCI Monthly Global 4 km Microplankton Fraction, DOI: 10.1594/PANGAEA.892211.

Mouw, C.B., A. Ciochetto, *B. Grunert, and *A. Yu (2017) LakeSuperior. NASA SeaWiFS Bio-optical Storage System (SeaBASS), NASA. https://seabass.gsfc.nasa.gov/archive/URI/Mouw/LakeSuperior/, DOI: 10.5067/SeaBASS/LAKESUPERIOR/DATA001

Mouw, C.B., A. Barnett, G.A. McKinley, L. Gloege, and D. Pilcher (2016), Global Ocean Particulate Organic  Carbon Flux Merged with Satellite Parameters, DOI: 10.1594/PANGAEA.855600.

Mouw, C.B., A. Ciochetto, T.S. Moore, M. Twardowski, J. Sullivan, A. Yu (2014) URI_Lake_Erie_2014. NASA SeaWiFS Bio-optical Storage System (SeaBASS), NASA. https://seabass.gsfc.nasa.gov/archive/URI/Mouw/NIH-NSF_Lake_Erie/URI_Lake_Erie_2014/archive, DOI: 10.5067/SeaBASS/NIH-NSF_LAKE_ERIE/DATA001
 
Mouw, C.B., A. Ciochetto, T.S. Moore, M. Twardowski, J. Sullivan, A. Yu (2013) URI_Lake_Erie_2013. NASA SeaWiFS Bio-optical Storage System (SeaBASS), NASA. https://seabass.gsfc.nasa.gov/archive/URI/Mouw/NIH-NSF_Lake_Erie/URI_Lake_Erie_2013/archive. DOI: 10.5067/SeaBASS/NIH-NSF_LAKE_ERIE/DATA001 

Mouw, C.B., J. A. Yoder (2010), SeaWiFS (version R2010.0) Monthly Global 9 km Microplankton Fraction, DOI: 10.1594/PANGAEA.860474.